Comprehensive bioremediation effect of phosphorus-mineralized bacterium Enterobacter sp. PMB-5 on cadmium contaminated soil-crop system.

Phosphate-mineralizing bacteria (PMBs) have been widely studied by inducing phosphate heavy metal precipitation, but current researches neglect to study their effects on soil-microbe-crop systems on cadmium (Cd) contaminated. Based on this, a strain PMB, Enterobacter sp. PMB-5, was inoculated into Cd contaminated pots to detect soil characteristics, Cd occurrence forms, soil biological activities, plant physiological and biochemical indicators. The results showed that the inoculation of strain PMB-5 significantly increased the available phosphorus content (85.97%-138.64%), Cd-residual fraction (11.04%-29.73%), soil enzyme activities (31.94%-304.63%), plant biomass (6.10%-59.81%), while decreased the state of Cd-HOAc (11.50%-31.17%) and plant bioconcentration factor (23.76%-44.24%). These findings indicated that strain PMB-5 could perform the function of phosphorus solubilization to realize the immobilization of Cd in the complex soil environment. Moreover, SEM-EDS, FTIR, XPS, and XRD analysis revealed that strain PMB-5 does not significantly alter the soil morphology, structure, elemental distribution, and chemical composition, which suggested that remediation of Cd contamination using strain PMB-5 would not further burden the soil. This research implies that PMB-5 could be a safe and effective bioinoculant for remediating Cd-contaminated soils, contributing to the sustainable management of soil health in contaminated environments.

The Beaumont behavioral intervention in a Chinese amyotrophic lateral sclerosis cohort.

OBJECTIVE: The prevalence of behavior impairment (27.38%) in the Chinese amyotrophic lateral sclerosis (ALS) cohort is lower. We hypothesize that the screening scales used among studies might not be appropriate to diagnose behavioral disorders in ALS patients. So, we urgently need to find a behavior scale with a high detection rate designed specifically for ALS. This study aims to verify the Chinese translation of the Beaumont Behavioral Inventory (BBI) as an effective assessment in a Chinese ALS cohort. METHODS: Ninety-eighty ALS patients and ninety-three healthy controls were included in this cross-sectional study. All participants took emotional state, overall cognitive, sleep quality and gastroenteric function, and behavioral evaluation. RESULTS: The BBI scores showed a strong association with the amyotrophic lateral sclerosis-Frontotemporal Dementia-Questionnaire (ALS-FTD-Q) (rs = 0.71, p < 0.001) as well as a moderate correlation with the Frontal Behavioral Inventory (FBI) (rs = 0.55, p < 0.001). High internal consistency was demonstrated in patients using BBI-after items (Cronbach's a = 0.89). When tested against clinical diagnoses, the optimal cutoff of total BBI score was identified at 5.5 (AUC = 0.95; SE = 0.02; 95% CI [0.91, 0.99]), the BBI reached optimal sensitivity and specificity values (91.5% and 87.2%). The BBI turned out to be more precise than the FBI (AUC = 0.76; SE = 0.05; 95% CI [0.66, 0.86]) and the ALS-FTD-Q (AUC = 0.84; SE = 0.04; 95% CI [0.77, 0.92]). CONCLUSION: The Chinese version of BBI is a quicker and more efficient instrument for assessing behavioral impairment in the ALS population in China.

Different survival strategies of the phosphate-mineralizing bacterium Enterobacter sp. PMB-5 in response to cadmium stress: Biomineralization, biosorption, and bioaccumulation.

The phosphate-mineralizing bacteria (PMBs) has shown great potential as a sustainable solution to support pollution remediation through its induced mineralization capacity. However, few studies have been conducted on the mechanism of cadmium (Cd) tolerance in PMBs. In this study, a PMB strain, Enterobacter sp. PMB-5, screened from Cd-contaminated rhizosphere soil, has high resistance to Cd (540 - 1220 mg/L) and solubilized phosphate (232.08 mg/L). The removal experiments showed that the strain PMB-5 removed 71.69-98.24% and 34.83-76.36% of Cd with and without biomineralization, respectively. The characterization result of SEM, EDS, TEM, XPS and XRD revealed that PMB-5 induced Cd to form amorphous phosphate precipitation through biomineralization and adopted different survival strategies, including biomineralization, bioaccumulation, and biosorption to resistance Cd in the microbial induced phosphate precipitation (MIPP) system and the non-MIPP system, respectively. Moreover, the results of whole genome sequencing and qRT-PCR indicated that phosphorus metabolism genes such as pst, pit, phn, ugp, ppk, etc. and heavy metal tolerance genes (including ion transport, ion efflux, redox, antioxidant stress), such as czcD, zntA, mgtA, mgtC, katE, SOD2, dsbA, cysM, etc. were molecular for the PMB-5 mineralization and Cd tolerance of PMB-5. Together, our findings suggested Enterobacter sp. PMB-5 is a potential target for developing more effective bioinoculants for Cd contamination remediation.

Enhanced cadmium phytoextraction efficiency of ryegrass (Lolium perenne L.) by porous media immobilized Enterobacter sp. TY-1.

Although studies on immobilized microorganisms have been conducted, their performance remains unclear for enhancing plants to remediate cadmium (Cd)-contaminated soil. In this study, a Cd-resistant strain TY-1 with good plant growth promotion traits was immobilized by biochar (BC) or oyster shell (OS) power to strengthen ryegrass to remediate Cd-contaminated soil. SEM-EDS combined with FTIR showed that TY-1 could tolerate Cd toxicity by surface precipitation, and functional groups such as hydroxyl and carbonyl groups might be involved. In the biocomposite treatments, soil pH increased, and the activity of fertility-related enzymes such as dehydrogenase increased by 109.01%-128.01%. The relative abundance of genus Saccharimonadales decreased from 7.97% to 3.35% in BS-TY and 2.61% in OS-TY, respectively. Thus, a suitable environment for ryegrass growth was created. The fresh weight, dry weight, plant height and Cd accumulation of ryegrass in TY treatment increased by 122.92%, 114.81%, 42.08% and 8.05%, respectively, compared to the control. Cd concentration in ryegrass was further increased in BC-TY and OS-TY by 24.14% and 40.23%, respectively. The improvement in soil microcosm and plant biomass forms an ongoing virtuous cycle, demonstrating that using carrier materials to improve the efficiency of microbial-assisted phytoremediation is realistic and feasible.

Characterization of a cadmium-resistant functional bacteria (Burkholderia sp. SRB-1) and mechanism analysis at physiochemical and genetic level.

In this study, the capacity of cadmium (Cd)-resistant plant growth-promoting bacteria (PGPB) Burkholderia sp. SRB-1 (SRB-1) and its mechanisms were explored through morphological characterizations, biochemical response, plant growth-promoting traits, and functional gene expression patterns. The results showed that SRB-1 was an excellent Cd-resistant bacteria (MIC was 420 mg L-1), and its maximum Cd removal rate reached 72.25%. Biosorption was the main removal method of Cd for SRB-1, preventing intracellular Cd accumulation and maintaining cellular metabolism. Various functional groups on the cell wall were involved in Cd binding, which deposited as CdS and CdCO3 on the cell surface according to XPS analysis and might be critical for reducing Cd physiochemical toxicity. Furthermore, metals exporting (zntA, czcA, czcB, czcC), detoxification (dsbA, cysM), and antioxidation (katE, katG, SOD1) related genes were annotated in the SRB-1 genome. The results of Cd distribution and antioxidative enzyme activity in SRB-1 also illustrated that Cd2+ efflux and antioxidative response were the main intracellular Cd-resistant mechanisms. These conclusions were further verified by qRT-PCR analysis. Overall, the strategies of extracellular biosorption, cation efflux, and intracellular detoxification jointly build the Cd-resistant system, which invested Burkholderia sp. SRB-1 with potential for bioremediation in heavily Cd-contaminated environmental sites.

Integrated biochemical and transcriptomic analysis reveals the effects of Burkholderia sp. SRB-1 on cadmium accumulating in Chrysopogon zizanioides L. under Cd stress.

Application of plant growth-promoting rhizobacteria plays a vital role in enhancing phytoremediation efficiency. In this study, multiple approaches were employed to investigate the underlying mechanisms of Burkholderia sp. SRB-1 (SRB-1) on elevating Cd uptake and accumulation. Inoculation experiment indicated that SRB-1 could facilitate plant growth and Cd tolerance, as evidenced by the enhanced plant biomass and antioxidative enzymes activities. Cd content in plant shoots and roots increased about 36.56%-39.66% and 25.97%-130.47% assisted with SRB-1 when compared with control. Transcriptomics analysis revealed that SRB-1 upregulated expression of amiE, AAO1-2 and GA2-ox related to auxin and gibberellin biosynthesis in roots. Auxin and gibberellin, as hormone signals, regulated plant Cd tolerance and growth through activating hormone signal transduction pathways, which might also contribute to 67.94% increase of dry weight. The higher expression levels of ATP-binding cassette transporter subfamilies (ABCB, ABCC, ABCD and ABCG) in Chrysopogon zizanioides roots contributed to higher Cd uptake in Cd15 B (323.83 mg kg-1) than Cd15 (136.28 mg kg-1). Further, SRB-1 facilitated Cd migration from roots to shoots via upregulating the expression of Nramp, ZIP and HMA families. Our integrative analysis provided a molecular-scale perspective on Burkholderia sp. SRB-1 contributing to C. zizanioides performance.

Effect of slow-released biomass alkaline amendments oyster shell on microecology in acidic heavy metal contaminated paddy soils.

Soil ecosystem functions and microbial community structure were severely impaired with long-term cadmium (Cd) contamination and acidification. To investigate the effect of amendments on soil physiochemical parameters and soil micro-ecology in acidic Cd contaminated soil, this study was conducted in a pot experiment with the application of calcium amendments, oyster shell powders (OS) and limestone (LM). Each amendment applied at ratios of 1.0%, 3.0%, and 5.0% (w/w), respectively. The results showed that the application of amendments increased the soil pH by 2.10-2.88, the bioavailable Cd decreased by 12.49%-19.48%, and un-bioavailable Cd increased by 96.57%-200.7%. The OS increased the richness index (Chao and Ace increased by 13.23%-16.20% and 7.13%-47.63%), and LM increased the microbial diversity index (Shannon increased by 1.14%-8.72% and Simpson indexes decreased by 28.00%-63.61%). In LM groups, soil microbial communities were significantly altered with increasing application concentrations, the relative abundance of phylum Proteobacteria, Bacteroidota and Gemmatimonadota increased, while Firmicute, Actinobacteria, Chloroflexi decreased. In OS treatments, the soil microbial community structure was basically unchanged. The correlation analysis showed that pH, TN, TP, CEC, OM were the dominant factors affecting the microbial community. This study has shown that application of amendments could effectively reduce the Cd bioavailability in soil, but LM altered the soil microbial community structure, while OS maintained the soil microbiological structure.

Responsive change of crop-specific soil bacterial community to cadmium in farmlands surrounding mine area of Southeast China.

In arable soils co-influenced by mining and farming, soil bacteria significantly affect metal (Cadmium, Cd) bioavailability and accumulation. To reveal the soil microecology response under this co-influence, three intersection areas (cornfield, vegetable field, and paddy field) were investigated. With a similar nutrient condition, the soils showed varied Cd levels (0.31-7.70 mg/kg), which was negatively related to the distance from mining water flow. Different soils showed varied microbial community structures, which were dominated by Chloroflexi (19.64-24.82%), Actinobacteria (15.49-31.96%), Acidobacteriota (9.46-20.31%), and Proteobacteria (11.88-14.57%) phyla. A strong correlation was observed between functional microbial taxon (e. g. Acidobacteriota), soil physicochemical properties, and Cd contents. The relative abundance of tolerant bacteria including Vicinamibacteraceae, Knoellia, Ardenticatenales, Lysobacter, etc. elevated with the increase of Cd, which contributed to the enrichment of heavy metal resistance genes (HRGs) and integration genes (intlI), thus enhancing the resistance to heavy metal pollution. Cd content rather than crop species was identified as the dominant factor that influenced the bacterial community. Nevertheless, the peculiar agrotype of the paddy field contributed to its higher HRGs and intlI abundance. These results provided fundamental information about the crop-specific physiochemical-bacterial interaction, which was helpful to evaluate agricultural environmental risk around the intersection of farmland and pollution sources.

Integrative analyses of geochemical parameters-microbe interactions reveal the variation of bacterial community assembly in multiple metal(loid)s contaminated arable regions.

Soil microbes play crucial roles in biochemical and geochemical processes in contaminated arable ecosystems. However, what factors determine the assembling process of soil bacterial community under multiple heavy metal (loid)s (HMs) stress and how communities respond to geochemical changes have rarely been understood. Therefore, a number of contaminated soils were sampled to explore the interactions among geochemical parameters, HMs and innate bacterial community. The results showed that soil biochemical activities were inhibited obviously with the increase of HMs. Significant differences were observed in bacterial composition and abundance in studied areas, with Actinobacteria, Proteobacteria, Chloroflexi, Acidobacteria and Firmicutes governing the bacterial community structure. Redundancy analysis and variation partition analysis revealed that about 67.33% of the variation in bacterial assemblages could be explained by physiochemical parameters (21.59%), biochemical parameters (11.64%), toxic metal (loid)s (9.11%) and the interaction effect of these variables (24.99%), among which total-arsenic and moisture were the main factors. Spearman correlation analysis also demonstrated that dehydrogenase, moisture and TOC have a positive correlation with bacterial community structure with As-Cd-Pb gradient. Altogether, this study would provide a comprehensive relationship between major environmental factors and bacterial assemblages, which could offer some baseline data to investigate the mechanisms of how communities respond to physiochemical changes.

Effects of environmental factors on soil bacterial community structure and diversity in different contaminated districts of Southwest China mine tailings.

A mass of tailings left by mineral exploitation have caused serious environmental pollution. Although many studies have shown that soil microorganisms have the potential to remediate environmental pollution, the interaction mechanism between microorganisms and the surrounding environment of tailings is still unclear. In this study, 15 samples around pyrite mine tailing were collected to explore the ecological effects of environmental factors on bacterial community. The results showed that most of the samples were acidic and contaminated by multiple metals. Cadmium (Cd), copper (Cu), nickel (Ni) migrated and accumulated to into downstream farmlands while chromium (Cr) was the opposite. Proteobacteria, Chloroflex and Actinobacteria were the dominant phyla. Soil pH, total phosphorus (TP), total nitrogen (TN), available potassium (AK), available phosphorus (AP), the bacteria abundance and diversity all gradually increased with the increase of the distance from the tailing. Invertase, acid phosphatase, total organic carbon (TOC), pH, TP and Cr were the main influencing factors to cause the variation of bacterial community. This work could help us to further understand the changes in soil microbial communities around pollution sources.

Responsiveness change of biochemistry and micro-ecology in alkaline soil under PAHs contamination with or without heavy metal interaction.

Co-presence of organic pollutants and heavy metals in soil is causing increasing concerns, but the lack of knowledge of relation between soil ecology and pollutant fate is limiting the developing of specific control strategy. This study investigated soil change under pyrene stress and its interaction with cadmium (Cd). Soil physicochemical properties were not seriously influenced. However, pollutants' presence easily varied soil microbial activity, quantity, and diversity. Under high-level pyrene, Cd presence contributed to soil indigenous microorganisms' adaption and soil microbial community structure stability. Soils with both pyrene and Cd presented 7.11-12.0% higher pyrene degradation compared with single pyrene treatment. High-throughput sequencing analysis indicated the proportion of Mycobacterium sp., a commonly known PAHs degrader, increased to 25.2-48.5% in treatments from 0.52% in control. This phenomenon was consistent with the increase of PAHs probable degraders (the ratio increased to 2.86-6.57% from 0.24% in control). Higher Cd bioavailability was also observed in soils with both pollutants than that with Cd alone. And Cd existence caused the elevation of Cd resistant bacterium Limnobacter sp. (increased to 12.2% in CdCK from 2.06% in control). Functional gene prediction also indicated that abundance of genes related to nutrient metabolism decreased dramatically with pollutants, while the abundances of energy metabolism, lipid metabolism, secondary metabolites biosynthesis-related genes increased (especially for aromatic compound degradation related genes). These results indicated the mutual effect and internal-interaction existed between pollutants and soils resulted in pollutants' fate and soil microbial changes, providing further information regarding pollutants dissipation and transformation under soil microbial response.

High-effectively degrade the di-(2-ethylhexyl) phthalate via biochemical system: Resistant bacterial flora and persulfate oxidation activated by BC@Fe3O4.

Di-(2-ethylhexyl) phthalate (DEHP) has been classified as a priority pollutant which increased the healthy risk to human and animals dramatically. Hence, a novel biochemical system combined by DEHP-resistant bacterial flora (B) and a green oxidant of persulfate (PS) activated by Nano-Fe3O4 was applied to degrade DEHP in contaminated soil. In this study, the resistant bacterial flora was screened from activated sludge and immobilized by sodium alginate (SAB). Nano-Fe3O4 was coated on biochar (BC@Fe3O4) to prevent agglomerating in soil. X-ray diffraction (XRD) and scanning electron microscope (SEM) were utilized to characterize BC@Fe3O4. Results demonstrated that the treatment of biochemical system (SAB + BC@Fe3O4 + PS) presented the maximum degradation rate about 92.56% within 24 days of incubation and improved soil microecology. The 16S rDNA sequences analysis of soil microorganisms showed a significantly different abundance and a similar diversity among different treatments. Kyoto Encyclopedia of Genes and Genomes (KEGG) functional genes difference analysis showed that some metabolic pathways, such as metabolism of cofactors and vitamins, energy metabolism, cell growth and death, replication and repair, were associated with the biodegradation of DEHP. Besides, DEHP was converted to MEHP and PA by biodegradation, while DEHP was converted to DBP and PA by persulfate and BC@Fe3O4, and then ultimately degraded to CO2 and H2O.

Ecological responses of soil microbial abundance and diversity to cadmium and soil properties in farmland around an enterprise-intensive region.

Microorganisms play a vital role in soil biochemical process in contaminated managed ecosystems. In the present study, a field investigation was conducted in farmland around an industrial intensive region contaminated with cadmium, and the changes of microbial assemblages in contaminated soils were assessed by 16S rRNA sequencing and the further statistical analysis. The results revealed obvious variations in microbial richness between referenced and contaminated soils, with Proteobacteri, Chloroflexi, Actinobacteria, Acidobacteria and Nitrospirae dominating the studied communities around the industrial intensive region. Redundancy analysis and Spearman correlation heatmap revealed that about 68.95 % of overall variation in microbial community composition was explained by soil physiochemical properties and Cd existence, among which pH, soil total phosphorus, total nitrogen, organic carbon (OC) and available Cd were identified as dominant factors. No significant difference was found in the similarities and Beta-diversity analysis among different groups. In conclusion, this study revealed the ecological effects of physiochemical parameters and Cd stress on the diversity and abundance of microbial communities, and these findings provided the detailed and integrated correlation between the main factors and microbial indexes in Cd contaminated farmland around the industrial intensive region.

Mechanism study of Chromium influenced soil remediated by an uptake-detoxification system using hyperaccumulator, resistant microbe consortium, and nano iron complex.

A soil heavy metal decontamination system was developed based on the immobilization of bioavailable metal fraction by iron-biochar nano-complex (BC@Fe3O4) and the uptake by Chromium (Cr) hyperaccumulator Leersia hexandra (L. hexandra) under the assistance of metal resistant microbe consortium (MC). In this system, L. hexandra was able to accumulate 485.1-785.0 mg kg-1 in root and 147.5-297.2 mg kg-1 of Cr in its aerial part. With MC assistance, more Cr could be translocated to the aerial part of L. hexandra, which dramatically improved its remediation potential. Meanwhile, BC@Fe3O4 application decreased bioavailable Cr in soil and reduced soil toxicity, which contributed to soil microbial community adaption and L. hexandra performance under high level of Cr concentration (elevated microbial activity, decreased plant stress response, enhanced L. hexandra growth and accumulation) without negative influence on accumulation efficiency. Moreover, details of the possible mechanistic insight into metal removal were discussed, which indicated a negative correlation of the extractable Cr with soil microecology and hyperaccumulator performance. Furthermore, the resistant bacteria successfully altered soil microbial community, enhanced its diversity, which was in favor of the soil quality improvement.

Effect of Serratia sp. K3 combined with organic materials on cadmium migration in soil-vetiveria zizanioides L. system and bacterial community in contaminated soil.

Phytoremediation is an economical strategy to harvest cadmium (Cd) from contaminated soil, but the efficiency of phytoremediation was affected by many factors. This study investigated the potential of Serratia sp. K3 (K3) assisted with straw biogas residue (SBR) or leavening fertilizer (LF) on improving the Cd migration efficiency and micro-environment in soil-vetiveria zizanioides L. system. The results showed that the acid soluble Cd in soil was increased by 2.83-29.79% in treatments compared with control (CK). In addition, Cd accumulation in the roots and shoots of vetiveria zizanioides were significantly enhanced by the combination of K3 and SBR/LF. Especially, the translocation factor of Cd increased by 21.53-62.37% in groups with K3 compared with the groups without K3, correspondingly. Furthermore, SBR/LF effectively changed bacterial community structure, and improved bacterial abundance. Relative abundance of functional genes related with carbohydrate/energy/amino acid metabolism were increased in groups of SBRB/LFB rhizosphere compared with CK. These results provide insight into the change of phytoremediation efficiency and soil bacterial communities in the vetiveria zizanioides rhizosphere after inoculation. This study may provide a promising method for improving phytoremediation in Cd contaminated soil.

Effect of modified coconut shell biochar on availability of heavy metals and biochemical characteristics of soil in multiple heavy metals contaminated soil.

On account of the potential in immobilizing metals and improving soil environment, various biochar materials have been extensively applied in environmental remediation. The purpose of this experiment was to evaluate the effect of modified coconut shell biochar (MCSB) on the availability of metals and soil biological activity in multi-metals (cadmium (Cd), nickel (Ni) and zinc (Zn)) contaminated soil. MCSB was obtained from coconut shell biochar (CSB) by hydrochloric acid pickling and ultrasonication, which has significantly improved its surface functional groups and microcosmic pore structure. Sandy soil samples were incubated at 25 °C amended with MCSB or CSB by 0%, 2.5% and 5% addition for 63 days, respectively. The results showed that the acid soluble Cd, Ni and Zn decreased by 30.1%, 57.2% and 12.7%, respectively, in groups with 5% MCSB addition, which indicated MCSB had a better effect on immobilizing metals compared with CSB. In addition, higher soil biological activities were detected in different treatments compared with control (CK). Especially, the maximum bacterial number was found in 5% MCSB treatment, which increased by 149.43% compared with CK. Accordingly, our results suggested that MCSB could be used as an ameliorant to immobilize heavy metals in contaminated soils and improve soil physicochemical and biological properties.

Fe3O4 nanoparticle-coated mushroom source biomaterial for Cr(VI) polluted liquid treatment and mechanism research.

Agrocybe cylindracea substrate-Fe3O4 (ACS-Fe3O4), a Fe3O4 nanoparticle-coated biomaterial derived from agriculture waste from mushroom cultivation, was developed to remove hexavalent chromium (Cr(VI)) from liquid. After modification, material surface became uneven with polyporous and crinkly structure which improved Cr-accommodation ability in a sound manner. Optimized by the Taguchi method, Cr(VI) removal percentage was up to 73.88 at 240 min, 40°C, pH 3, Cr(VI) concentration 200 mg l-1, dosage 12 g l-1, rpm 200. The efficient Cr(VI) removal was due to the combined effect of adsorption and redox. In addition, verification test using tannery wastewater, with removal percentage of Cr(VI) and total Cr reaching 98.35 and 95.6, provided further evidence for the efficiency and feasibility of ACS-Fe3O4. The effect of storage time of the material on Cr(VI) removal was small, which enhanced its value in practical application. Results indicated that metal removal was mainly influenced by solution concentration, adsorbent dosage and treatment time. The experimental data obtained were successfully fitted with the Langmuir isotherm model. Thermodynamic study indicated the endothermic nature of the process. The results confirmed that ACS-Fe3O4 as novel material derived from waste, with long-term stability, could be applied for heavy metal removal from wastewater and waste cycling.